jhhlp_006802 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_006802

Protein kinase domain-containing protein. (515 aa)

Predicted Functional Partners:

jhhlp_001147

0.772

jhhlp_004673

0.767

jhhlp_008735

0.736

jhhlp_007603

0.736

jhhlp_004011

0.721

jhhlp_001121

0.712

jhhlp_007236

0.710

jhhlp_005872

0.702

jhhlp_005871

0.702

jhhlp_002633

0.702

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_001121	jhhlp_006802	A0A2N3NHE1	A0A2N3N2S6	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Protein kinase domain-containing protein.	0.712
jhhlp_001147	jhhlp_006802	A0A2N3NHE7	A0A2N3N2S6	RRM_2 domain-containing protein.	Protein kinase domain-containing protein.	0.772
jhhlp_002633	jhhlp_004011	A0A2N3NEH5	A0A2N3NAD0	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	WD_REPEATS_REGION domain-containing protein.	0.652
jhhlp_002633	jhhlp_004673	A0A2N3NEH5	A0A2N3NC91	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Protein kinase domain-containing protein.	0.778
jhhlp_002633	jhhlp_006802	A0A2N3NEH5	A0A2N3N2S6	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Protein kinase domain-containing protein.	0.702
jhhlp_002633	jhhlp_007603	A0A2N3NEH5	A0A2N3N002	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	AMPK1_CBM domain-containing protein.	0.908
jhhlp_002633	jhhlp_008735	A0A2N3NEH5	A0A2N3MYV3	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	AMPKBI domain-containing protein.	0.908
jhhlp_004011	jhhlp_002633	A0A2N3NAD0	A0A2N3NEH5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.652
jhhlp_004011	jhhlp_004673	A0A2N3NAD0	A0A2N3NC91	WD_REPEATS_REGION domain-containing protein.	Protein kinase domain-containing protein.	0.918
jhhlp_004011	jhhlp_005871	A0A2N3NAD0	A0A2N3N4B6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.704
jhhlp_004011	jhhlp_005872	A0A2N3NAD0	A0A2N3N4A7	WD_REPEATS_REGION domain-containing protein.	Rho-GAP domain-containing protein.	0.704
jhhlp_004011	jhhlp_006802	A0A2N3NAD0	A0A2N3N2S6	WD_REPEATS_REGION domain-containing protein.	Protein kinase domain-containing protein.	0.721
jhhlp_004011	jhhlp_007603	A0A2N3NAD0	A0A2N3N002	WD_REPEATS_REGION domain-containing protein.	AMPK1_CBM domain-containing protein.	0.698
jhhlp_004011	jhhlp_008735	A0A2N3NAD0	A0A2N3MYV3	WD_REPEATS_REGION domain-containing protein.	AMPKBI domain-containing protein.	0.793
jhhlp_004673	jhhlp_002633	A0A2N3NC91	A0A2N3NEH5	Protein kinase domain-containing protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.778
jhhlp_004673	jhhlp_004011	A0A2N3NC91	A0A2N3NAD0	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.918
jhhlp_004673	jhhlp_005871	A0A2N3NC91	A0A2N3N4B6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.801
jhhlp_004673	jhhlp_005872	A0A2N3NC91	A0A2N3N4A7	Protein kinase domain-containing protein.	Rho-GAP domain-containing protein.	0.801
jhhlp_004673	jhhlp_006802	A0A2N3NC91	A0A2N3N2S6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.767
jhhlp_004673	jhhlp_007603	A0A2N3NC91	A0A2N3N002	Protein kinase domain-containing protein.	AMPK1_CBM domain-containing protein.	0.755