STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_005503Uncharacterized protein. (341 aa)    
Predicted Functional Partners:
jhhlp_005584
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.643
jhhlp_003276
Uncharacterized protein.
   
 
  0.623
jhhlp_001400
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.601
jhhlp_003221
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.581
jhhlp_003307
Uncharacterized protein.
   
 
  0.581
jhhlp_005174
Uncharacterized protein.
   
 
  0.578
jhhlp_008184
Uncharacterized protein.
   
 
  0.577
jhhlp_005236
RRN9 domain-containing protein.
   
 
  0.577
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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