STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_005878Uncharacterized protein. (451 aa)    
Predicted Functional Partners:
jhhlp_002589
Ribosomal_L5_C domain-containing protein.
   
 
 0.966
jhhlp_002096
MRP-L46 domain-containing protein.
   
 
 0.965
jhhlp_006775
Uncharacterized protein.
   
 
 0.964
jhhlp_005510
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.955
jhhlp_008669
Uncharacterized protein.
   
 
 0.953
jhhlp_000127
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.950
jhhlp_001934
Uncharacterized protein.
   
 
 0.942
jhhlp_006127
MRP-S28 domain-containing protein.
   
   0.938
jhhlp_005785
Uncharacterized protein.
   
   0.933
jhhlp_001448
Uncharacterized protein.
   
 
 0.932
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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