STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_006481RIC1 domain-containing protein. (1065 aa)    
Predicted Functional Partners:
jhhlp_006480
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
 
  
   0.886
jhhlp_006465
Uncharacterized protein.
   
 0.867
jhhlp_000900
Uncharacterized protein.
    
 0.842
jhhlp_005662
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.812
jhhlp_002155
Uncharacterized protein.
    
 0.805
jhhlp_008297
Uncharacterized protein.
    
 0.782
jhhlp_002991
Uncharacterized protein.
     
 0.770
jhhlp_000260
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
  0.769
jhhlp_001789
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.764
jhhlp_005519
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.749
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.