STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_006410Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
jhhlp_002222
Uncharacterized protein.
  
 
0.990
jhhlp_002426
Uncharacterized protein.
  
 0.962
jhhlp_001155
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
   0.943
jhhlp_000974
Uncharacterized protein.
    
   0.943
jhhlp_006412
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
 
    
 0.613
jhhlp_006756
Uncharacterized protein.
   
   0.607
jhhlp_001168
Uncharacterized protein.
    
   0.585
jhhlp_006116
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
   0.559
jhhlp_005819
Uncharacterized protein.
  
  
 0.558
jhhlp_001018
Uncharacterized protein.
    
   0.557
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.