STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_006473Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
jhhlp_006474
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
      0.891
jhhlp_002211
Uncharacterized protein.
   
 
 0.886
jhhlp_004045
EMC1_C domain-containing protein.
    
 
 0.876
jhhlp_002507
TPR_REGION domain-containing protein.
    
 
 0.875
jhhlp_006518
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.874
jhhlp_002118
Uncharacterized protein.
    
 
 0.789
jhhlp_007716
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.788
jhhlp_002216
Uncharacterized protein.
 
      0.494
jhhlp_003108
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
   0.412
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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