Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | jhhlp_000413 | A0A2N3NHU0 | A0A2N3NL22 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA helicase. | 0.998 |
ERB1 | jhhlp_001477 | A0A2N3NHU0 | A0A2N3NI98 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nop domain-containing protein. | 0.987 |
ERB1 | jhhlp_002284 | A0A2N3NHU0 | A0A2N3NDN3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Brix domain-containing protein. | 0.993 |
ERB1 | jhhlp_006349 | A0A2N3NHU0 | A0A2N3N5M6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.926 |
ERB1 | jhhlp_006548 | A0A2N3NHU0 | A0A2N3N696 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | FK506-binding protein. | 0.917 |
ERB1 | jhhlp_006601 | A0A2N3NHU0 | A0A2N3N6C2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | PUA domain-containing protein. | 0.941 |
jhhlp_000413 | ERB1 | A0A2N3NL22 | A0A2N3NHU0 | RNA helicase. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
jhhlp_000413 | jhhlp_001477 | A0A2N3NL22 | A0A2N3NI98 | RNA helicase. | Nop domain-containing protein. | 0.989 |
jhhlp_000413 | jhhlp_002284 | A0A2N3NL22 | A0A2N3NDN3 | RNA helicase. | Brix domain-containing protein. | 0.990 |
jhhlp_000413 | jhhlp_006349 | A0A2N3NL22 | A0A2N3N5M6 | RNA helicase. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.870 |
jhhlp_000413 | jhhlp_006548 | A0A2N3NL22 | A0A2N3N696 | RNA helicase. | FK506-binding protein. | 0.883 |
jhhlp_000413 | jhhlp_006601 | A0A2N3NL22 | A0A2N3N6C2 | RNA helicase. | PUA domain-containing protein. | 0.984 |
jhhlp_001477 | ERB1 | A0A2N3NI98 | A0A2N3NHU0 | Nop domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.987 |
jhhlp_001477 | jhhlp_000413 | A0A2N3NI98 | A0A2N3NL22 | Nop domain-containing protein. | RNA helicase. | 0.989 |
jhhlp_001477 | jhhlp_002284 | A0A2N3NI98 | A0A2N3NDN3 | Nop domain-containing protein. | Brix domain-containing protein. | 0.932 |
jhhlp_001477 | jhhlp_006349 | A0A2N3NI98 | A0A2N3N5M6 | Nop domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.994 |
jhhlp_001477 | jhhlp_006548 | A0A2N3NI98 | A0A2N3N696 | Nop domain-containing protein. | FK506-binding protein. | 0.900 |
jhhlp_001477 | jhhlp_006601 | A0A2N3NI98 | A0A2N3N6C2 | Nop domain-containing protein. | PUA domain-containing protein. | 0.994 |
jhhlp_001884 | jhhlp_006548 | A0A2N3NCF1 | A0A2N3N696 | RING-CH-type domain-containing protein. | FK506-binding protein. | 0.887 |
jhhlp_002284 | ERB1 | A0A2N3NDN3 | A0A2N3NHU0 | Brix domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
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