STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_006548FK506-binding protein. (473 aa)    
Predicted Functional Partners:
jhhlp_003538
Uncharacterized protein.
    
 0.931
jhhlp_002284
Brix domain-containing protein.
   
 
 0.923
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.917
jhhlp_002416
Uncharacterized protein.
 
  
   0.913
jhhlp_002417
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
 
  
   0.913
jhhlp_001477
Nop domain-containing protein.
   
 
 0.900
jhhlp_001884
RING-CH-type domain-containing protein.
    
 
 0.887
jhhlp_006349
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.886
jhhlp_006601
PUA domain-containing protein.
   
   0.883
jhhlp_000413
RNA helicase.
   
 
 0.883
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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