jhhlp_006569 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_006569

Uncharacterized protein. (303 aa)

Predicted Functional Partners:

jhhlp_003680

0.608

jhhlp_000256

0.578

jhhlp_007032

0.560

jhhlp_008584

0.556

jhhlp_007704

0.556

jhhlp_002605

0.556

jhhlp_000025

0.556

jhhlp_001038

0.528

jhhlp_002982

0.517

jhhlp_000999

0.515

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000025	jhhlp_002605	A0A2N3NLE5	A0A2N3NEI4	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.753
jhhlp_000025	jhhlp_006569	A0A2N3NLE5	A0A2N3N6B9	Uncharacterized protein.	Uncharacterized protein.	0.556
jhhlp_000025	jhhlp_007704	A0A2N3NLE5	A0A2N3N0B9	Uncharacterized protein.	Uridine kinase; Belongs to the uridine kinase family.	0.799
jhhlp_000025	jhhlp_008584	A0A2N3NLE5	A0A2N3MYG7	Uncharacterized protein.	Uncharacterized protein.	0.833
jhhlp_000256	jhhlp_001038	A0A2N3NKE2	A0A2N3NK48	SCA7 domain-containing protein.	Uncharacterized protein.	0.990
jhhlp_000256	jhhlp_002605	A0A2N3NKE2	A0A2N3NEI4	SCA7 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.997
jhhlp_000256	jhhlp_002982	A0A2N3NKE2	A0A2N3NFN9	SCA7 domain-containing protein.	TFIID_20kDa domain-containing protein.	0.997
jhhlp_000256	jhhlp_003680	A0A2N3NKE2	A0A2N3N9I7	SCA7 domain-containing protein.	Uncharacterized protein.	0.993
jhhlp_000256	jhhlp_006569	A0A2N3NKE2	A0A2N3N6B9	SCA7 domain-containing protein.	Uncharacterized protein.	0.578
jhhlp_000999	jhhlp_006569	A0A2N3NK44	A0A2N3N6B9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.515
jhhlp_000999	jhhlp_007032	A0A2N3NK44	A0A2N3N1H0	Zn(2)-C6 fungal-type domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.631
jhhlp_001038	jhhlp_000256	A0A2N3NK48	A0A2N3NKE2	Uncharacterized protein.	SCA7 domain-containing protein.	0.990
jhhlp_001038	jhhlp_002605	A0A2N3NK48	A0A2N3NEI4	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.994
jhhlp_001038	jhhlp_002982	A0A2N3NK48	A0A2N3NFN9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.988
jhhlp_001038	jhhlp_003680	A0A2N3NK48	A0A2N3N9I7	Uncharacterized protein.	Uncharacterized protein.	0.995
jhhlp_001038	jhhlp_006569	A0A2N3NK48	A0A2N3N6B9	Uncharacterized protein.	Uncharacterized protein.	0.528
jhhlp_002605	jhhlp_000025	A0A2N3NEI4	A0A2N3NLE5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.753
jhhlp_002605	jhhlp_000256	A0A2N3NEI4	A0A2N3NKE2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	SCA7 domain-containing protein.	0.997
jhhlp_002605	jhhlp_001038	A0A2N3NEI4	A0A2N3NK48	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.994
jhhlp_002605	jhhlp_002982	A0A2N3NEI4	A0A2N3NFN9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	TFIID_20kDa domain-containing protein.	0.996