Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| jhhlp_000679 | jhhlp_003528 | A0A2N3NJ69 | A0A2N3N905 | Uncharacterized protein. | Cytochrome b5 heme-binding domain-containing protein. | 0.945 |
| jhhlp_000679 | jhhlp_006676 | A0A2N3NJ69 | A0A2N3N6M7 | Uncharacterized protein. | Uncharacterized protein. | 0.448 |
| jhhlp_000679 | jhhlp_008358 | A0A2N3NJ69 | A0A2N3MXU4 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.968 |
| jhhlp_001948 | jhhlp_003365 | A0A2N3NCP9 | A0A2N3NGM3 | Uncharacterized protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.676 |
| jhhlp_001948 | jhhlp_003550 | A0A2N3NCP9 | A0A2N3N960 | Uncharacterized protein. | Uncharacterized protein. | 0.678 |
| jhhlp_001948 | jhhlp_005550 | A0A2N3NCP9 | A0A2N3N3G6 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.625 |
| jhhlp_001948 | jhhlp_006067 | A0A2N3NCP9 | A0A2N3N4V3 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.556 |
| jhhlp_001948 | jhhlp_006676 | A0A2N3NCP9 | A0A2N3N6M7 | Uncharacterized protein. | Uncharacterized protein. | 0.413 |
| jhhlp_001948 | jhhlp_007266 | A0A2N3NCP9 | A0A2N3N260 | Uncharacterized protein. | RPOL4c domain-containing protein. | 0.637 |
| jhhlp_003365 | jhhlp_001948 | A0A2N3NGM3 | A0A2N3NCP9 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Uncharacterized protein. | 0.676 |
| jhhlp_003365 | jhhlp_003550 | A0A2N3NGM3 | A0A2N3N960 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Uncharacterized protein. | 0.999 |
| jhhlp_003365 | jhhlp_005550 | A0A2N3NGM3 | A0A2N3N3G6 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | RPOLD domain-containing protein. | 0.999 |
| jhhlp_003365 | jhhlp_006067 | A0A2N3NGM3 | A0A2N3N4V3 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| jhhlp_003365 | jhhlp_006676 | A0A2N3NGM3 | A0A2N3N6M7 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Uncharacterized protein. | 0.471 |
| jhhlp_003365 | jhhlp_007266 | A0A2N3NGM3 | A0A2N3N260 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | RPOL4c domain-containing protein. | 0.999 |
| jhhlp_003528 | jhhlp_000679 | A0A2N3N905 | A0A2N3NJ69 | Cytochrome b5 heme-binding domain-containing protein. | Uncharacterized protein. | 0.945 |
| jhhlp_003528 | jhhlp_006676 | A0A2N3N905 | A0A2N3N6M7 | Cytochrome b5 heme-binding domain-containing protein. | Uncharacterized protein. | 0.513 |
| jhhlp_003528 | jhhlp_008358 | A0A2N3N905 | A0A2N3MXU4 | Cytochrome b5 heme-binding domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.945 |
| jhhlp_003550 | jhhlp_001948 | A0A2N3N960 | A0A2N3NCP9 | Uncharacterized protein. | Uncharacterized protein. | 0.678 |
| jhhlp_003550 | jhhlp_003365 | A0A2N3N960 | A0A2N3NGM3 | Uncharacterized protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.999 |
page 1 of 3