jhhlp_004967 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_004967

Uncharacterized protein. (1474 aa)

Predicted Functional Partners:

jhhlp_006296

0.696

jhhlp_006605

0.638

jhhlp_001155

0.617

jhhlp_003559

0.613

jhhlp_004688

0.613

jhhlp_002143

0.613

jhhlp_002813

0.607

jhhlp_002590

0.585

jhhlp_000924

0.573

jhhlp_008277

0.560

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000924	jhhlp_002813	A0A2N3NJU0	A0A2N3NFA7	ENTH domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.896
jhhlp_000924	jhhlp_004967	A0A2N3NJU0	A0A2N3N7Z8	ENTH domain-containing protein.	Uncharacterized protein.	0.573
jhhlp_001155	jhhlp_002143	A0A2N3NHI8	A0A2N3NDF9	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	ATPase_AAA_core domain-containing protein.	0.961
jhhlp_001155	jhhlp_003559	A0A2N3NHI8	A0A2N3N928	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.947
jhhlp_001155	jhhlp_004688	A0A2N3NHI8	A0A2N3NCB0	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.961
jhhlp_001155	jhhlp_004967	A0A2N3NHI8	A0A2N3N7Z8	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.617
jhhlp_001155	jhhlp_006605	A0A2N3NHI8	A0A2N3N6B6	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.982
jhhlp_002143	jhhlp_001155	A0A2N3NDF9	A0A2N3NHI8	ATPase_AAA_core domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.961
jhhlp_002143	jhhlp_004967	A0A2N3NDF9	A0A2N3N7Z8	ATPase_AAA_core domain-containing protein.	Uncharacterized protein.	0.613
jhhlp_002143	jhhlp_006296	A0A2N3NDF9	A0A2N3N5H3	ATPase_AAA_core domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.511
jhhlp_002143	jhhlp_006605	A0A2N3NDF9	A0A2N3N6B6	ATPase_AAA_core domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.964
jhhlp_002590	jhhlp_004967	A0A2N3NEH9	A0A2N3N7Z8	USP domain-containing protein.	Uncharacterized protein.	0.585
jhhlp_002813	jhhlp_000924	A0A2N3NFA7	A0A2N3NJU0	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	ENTH domain-containing protein.	0.896
jhhlp_002813	jhhlp_004967	A0A2N3NFA7	A0A2N3N7Z8	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.607
jhhlp_003559	jhhlp_001155	A0A2N3N928	A0A2N3NHI8	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.947
jhhlp_003559	jhhlp_004967	A0A2N3N928	A0A2N3N7Z8	Uncharacterized protein.	Uncharacterized protein.	0.613
jhhlp_003559	jhhlp_006296	A0A2N3N928	A0A2N3N5H3	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.436
jhhlp_003559	jhhlp_006605	A0A2N3N928	A0A2N3N6B6	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.958
jhhlp_004688	jhhlp_001155	A0A2N3NCB0	A0A2N3NHI8	Uncharacterized protein; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.961
jhhlp_004688	jhhlp_004967	A0A2N3NCB0	A0A2N3N7Z8	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.613