STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_004962TPR_REGION domain-containing protein. (1599 aa)    
Predicted Functional Partners:
jhhlp_003670
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.818
jhhlp_003635
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.771
jhhlp_006619
Uncharacterized protein.
    
 0.769
jhhlp_001479
DOC domain-containing protein.
    
 0.766
jhhlp_002075
Uncharacterized protein.
    
 0.765
jhhlp_008327
Uncharacterized protein.
    
 0.763
jhhlp_001286
Uncharacterized protein.
    
 0.761
jhhlp_001366
ANAPC5 domain-containing protein.
    
 0.755
jhhlp_002308
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.745
jhhlp_000945
Uncharacterized protein.
    
 0.744
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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