STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_004760SET domain-containing protein. (374 aa)    
Predicted Functional Partners:
jhhlp_005639
MINDY_DUB domain-containing protein.
    
 0.744
jhhlp_002524
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
     
 0.542
jhhlp_003280
Uncharacterized protein.
     
 0.524
jhhlp_000665
Uncharacterized protein.
     
 0.524
jhhlp_002460
SET domain-containing protein.
    
 
 0.474
jhhlp_001337
RMT2 domain-containing protein.
   
  
 0.460
jhhlp_004321
Glyceraldehyde-3-phosphate dehydrogenase.
    
 
 0.452
jhhlp_004218
Citrate synthase; Belongs to the citrate synthase family.
    
  0.448
jhhlp_001484
Citrate synthase; Belongs to the citrate synthase family.
    
  0.448
jhhlp_003698
Uncharacterized protein.
    
 0.447
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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