STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_003793Nascent polypeptide-associated complex subunit beta. (150 aa)    
Predicted Functional Partners:
jhhlp_001411
NAC-A/B domain-containing protein.
   
 
 0.998
jhhlp_004495
Uncharacterized protein.
   
 
 0.985
jhhlp_007291
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.976
jhhlp_001170
Ribosomal_L23eN domain-containing protein.
   
 
 0.976
jhhlp_000077
Uncharacterized protein.
   
   0.974
jhhlp_001367
Uncharacterized protein.
   
   0.968
jhhlp_000237
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.967
jhhlp_006149
Ribosomal_L7Ae domain-containing protein.
   
   0.965
jhhlp_006148
Ribosomal_L16 domain-containing protein.
   
   0.965
jhhlp_000348
Uncharacterized protein.
   
   0.964
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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