STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_004012Uncharacterized protein. (2278 aa)    
Predicted Functional Partners:
jhhlp_005664
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.573
jhhlp_002736
Uncharacterized protein.
    
 
 0.551
jhhlp_007479
Uncharacterized protein.
 
  
 
 0.494
jhhlp_003231
Uncharacterized protein.
 
  
 
 0.468
jhhlp_000366
Uncharacterized protein.
 
  
 
 0.468
jhhlp_008116
RNA-dependent RNA polymerase.
    
 
 0.453
jhhlp_003821
Uncharacterized protein.
    
 
 0.453
jhhlp_002930
Uncharacterized protein.
    
 
0.453
jhhlp_003792
A to I editase domain-containing protein; Belongs to the cytochrome P450 family.
   
  
 0.445
jhhlp_007896
RNA-dependent RNA polymerase.
    
 
 0.422
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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