STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_004046EST1_DNA_bind domain-containing protein. (800 aa)    
Predicted Functional Partners:
jhhlp_003830
RRM domain-containing protein.
   
 0.994
jhhlp_004591
Uncharacterized protein.
    
 0.918
jhhlp_002316
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.909
jhhlp_004479
RRM domain-containing protein.
    
 0.899
jhhlp_004622
Nuclear cap-binding protein subunit 2.
   
 0.876
jhhlp_003293
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.871
jhhlp_006378
Uncharacterized protein.
    
 0.859
jhhlp_003803
Uncharacterized protein.
    
 0.859
jhhlp_003804
Uncharacterized protein.
    
 0.859
jhhlp_002579
Uncharacterized protein.
     
 0.831
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
Server load: low (20%) [HD]