STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_002022zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (87 aa)    
Predicted Functional Partners:
jhhlp_005213
zf-Tim10_DDP domain-containing protein.
   
 0.992
jhhlp_000876
Uncharacterized protein.
   
 0.928
jhhlp_004678
zf-Tim10_DDP domain-containing protein.
   
 0.913
jhhlp_007833
CHCH domain-containing protein.
   
 0.894
jhhlp_002592
Uncharacterized protein.
   
 
 0.854
jhhlp_004420
Small nuclear ribonucleoprotein Sm D2.
   
    0.771
jhhlp_006349
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.738
jhhlp_007199
Prohibitin.
   
 
 0.704
jhhlp_005679
Sulfhydryl oxidase.
   
 
 0.685
jhhlp_008734
Uncharacterized protein.
   
 
 0.667
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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