STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_002115Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family. (474 aa)    
Predicted Functional Partners:
jhhlp_004284
Histone H3; Belongs to the histone H3 family.
   
 0.868
jhhlp_003329
Deacetylase sirtuin-type domain-containing protein.
    
 0.772
jhhlp_003245
Chromo domain-containing protein.
    
 0.732
jhhlp_005441
Fn3_like domain-containing protein.
    
 0.711
jhhlp_000713
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.710
jhhlp_000920
PA14 domain-containing protein.
    
 0.710
jhhlp_007938
Chromo domain-containing protein.
    
 0.706
jhhlp_004901
Chromo domain-containing protein.
    
 0.706
jhhlp_003517
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.703
jhhlp_008118
Histone H2A; Belongs to the histone H2A family.
    
 0.698
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.