jhhlp_002129 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_002129

Uncharacterized protein. (238 aa)

Predicted Functional Partners:

jhhlp_000468

0.965

jhhlp_001317

0.964

jhhlp_002214

0.940

jhhlp_006021

0.915

jhhlp_002336

0.911

jhhlp_005359

0.909

jhhlp_000232

0.909

jhhlp_002283

0.906

jhhlp_001271

0.906

jhhlp_007333

0.898

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000232	jhhlp_000468	A0A2N3NKK3	A0A2N3NKX8	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.904
jhhlp_000232	jhhlp_001271	A0A2N3NKK3	A0A2N3NHR2	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.988
jhhlp_000232	jhhlp_001317	A0A2N3NKK3	A0A2N3NHY9	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	CAP-Gly domain-containing protein.	0.496
jhhlp_000232	jhhlp_002129	A0A2N3NKK3	A0A2N3ND73	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.909
jhhlp_000232	jhhlp_002214	A0A2N3NKK3	A0A2N3NDG5	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.497
jhhlp_000232	jhhlp_002283	A0A2N3NKK3	A0A2N3NDJ8	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.988
jhhlp_000232	jhhlp_002336	A0A2N3NKK3	A0A2N3NDZ8	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.483
jhhlp_000232	jhhlp_006021	A0A2N3NKK3	A0A2N3N4R3	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	HORMA domain-containing protein.	0.882
jhhlp_000232	jhhlp_007333	A0A2N3NKK3	A0A2N3N2C2	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.748
jhhlp_000468	jhhlp_000232	A0A2N3NKX8	A0A2N3NKK3	Uncharacterized protein.	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.904
jhhlp_000468	jhhlp_001271	A0A2N3NKX8	A0A2N3NHR2	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.895
jhhlp_000468	jhhlp_001317	A0A2N3NKX8	A0A2N3NHY9	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.859
jhhlp_000468	jhhlp_002129	A0A2N3NKX8	A0A2N3ND73	Uncharacterized protein.	Uncharacterized protein.	0.965
jhhlp_000468	jhhlp_002214	A0A2N3NKX8	A0A2N3NDG5	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.760
jhhlp_000468	jhhlp_002283	A0A2N3NKX8	A0A2N3NDJ8	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.895
jhhlp_000468	jhhlp_002336	A0A2N3NKX8	A0A2N3NDZ8	Uncharacterized protein.	Uncharacterized protein.	0.611
jhhlp_000468	jhhlp_005359	A0A2N3NKX8	A0A2N3N6P3	Uncharacterized protein.	Uncharacterized protein.	0.904
jhhlp_000468	jhhlp_006021	A0A2N3NKX8	A0A2N3N4R3	Uncharacterized protein.	HORMA domain-containing protein.	0.879
jhhlp_000468	jhhlp_007333	A0A2N3NKX8	A0A2N3N2C2	Uncharacterized protein.	Uncharacterized protein.	0.865
jhhlp_001271	jhhlp_000232	A0A2N3NHR2	A0A2N3NKK3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.988