Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| jhhlp_000923 | jhhlp_001438 | A0A2N3NJT7 | A0A2N3NI85 | RING-type domain-containing protein. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.998 |
| jhhlp_000923 | jhhlp_001541 | A0A2N3NJT7 | A0A2N3NIK5 | RING-type domain-containing protein. | BSD domain-containing protein. | 0.998 |
| jhhlp_000923 | jhhlp_001932 | A0A2N3NJT7 | A0A2N3NCU9 | RING-type domain-containing protein. | Uncharacterized protein. | 0.998 |
| jhhlp_000923 | jhhlp_002169 | A0A2N3NJT7 | A0A2N3NDB9 | RING-type domain-containing protein. | Uncharacterized protein. | 0.998 |
| jhhlp_000923 | jhhlp_002750 | A0A2N3NJT7 | A0A2N3NF09 | RING-type domain-containing protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.998 |
| jhhlp_000923 | jhhlp_002844 | A0A2N3NJT7 | A0A2N3NF71 | RING-type domain-containing protein. | Cyclin_C_2 domain-containing protein. | 0.999 |
| jhhlp_000923 | jhhlp_003223 | A0A2N3NJT7 | A0A2N3NG84 | RING-type domain-containing protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.998 |
| jhhlp_000923 | jhhlp_004288 | A0A2N3NJT7 | A0A2N3NB56 | RING-type domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.999 |
| jhhlp_000923 | jhhlp_006256 | A0A2N3NJT7 | A0A2N3N5D7 | RING-type domain-containing protein. | Uncharacterized protein. | 0.972 |
| jhhlp_000923 | jhhlp_007689 | A0A2N3NJT7 | A0A2N3N0B3 | RING-type domain-containing protein. | Uncharacterized protein. | 0.982 |
| jhhlp_001438 | jhhlp_000923 | A0A2N3NI85 | A0A2N3NJT7 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | RING-type domain-containing protein. | 0.998 |
| jhhlp_001438 | jhhlp_001541 | A0A2N3NI85 | A0A2N3NIK5 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | BSD domain-containing protein. | 0.999 |
| jhhlp_001438 | jhhlp_001932 | A0A2N3NI85 | A0A2N3NCU9 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Uncharacterized protein. | 0.999 |
| jhhlp_001438 | jhhlp_002169 | A0A2N3NI85 | A0A2N3NDB9 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Uncharacterized protein. | 0.999 |
| jhhlp_001438 | jhhlp_002750 | A0A2N3NI85 | A0A2N3NF09 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
| jhhlp_001438 | jhhlp_002844 | A0A2N3NI85 | A0A2N3NF71 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Cyclin_C_2 domain-containing protein. | 0.990 |
| jhhlp_001438 | jhhlp_003223 | A0A2N3NI85 | A0A2N3NG84 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.997 |
| jhhlp_001438 | jhhlp_004288 | A0A2N3NI85 | A0A2N3NB56 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Helicase ATP-binding domain-containing protein. | 0.999 |
| jhhlp_001438 | jhhlp_006256 | A0A2N3NI85 | A0A2N3N5D7 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Uncharacterized protein. | 0.998 |
| jhhlp_001438 | jhhlp_007689 | A0A2N3NI85 | A0A2N3N0B3 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Uncharacterized protein. | 0.983 |
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