STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_002915PKS_ER domain-containing protein. (347 aa)    
Predicted Functional Partners:
jhhlp_001407
Uncharacterized protein.
   
  0.526
jhhlp_000971
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
 
 
    0.408
jhhlp_008275
Aldo_ket_red domain-containing protein.
   
 
 0.406
jhhlp_008183
Aldo_ket_red domain-containing protein.
   
 
 0.406
jhhlp_007907
Aldo_ket_red domain-containing protein.
   
 
 0.406
jhhlp_006796
Aldo_ket_red domain-containing protein.
   
 
 0.406
jhhlp_005011
Aldo_ket_red domain-containing protein.
   
 
 0.406
jhhlp_004578
Aldo_ket_red domain-containing protein.
   
 
 0.406
jhhlp_002247
Uncharacterized protein.
   
 
 0.406
jhhlp_001401
Aldo_ket_red domain-containing protein.
   
 
 0.406
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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