STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_002977Uncharacterized protein. (1013 aa)    
Predicted Functional Partners:
jhhlp_007149
Protein kinase domain-containing protein.
    
 0.789
jhhlp_005550
RPOLD domain-containing protein.
    
 0.772
jhhlp_001914
Uncharacterized protein.
   
 0.764
jhhlp_001190
Rtt106 domain-containing protein.
    
 
 0.757
jhhlp_001505
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.754
jhhlp_003566
Uncharacterized protein; Belongs to the actin family.
    
 0.747
jhhlp_001988
Uncharacterized protein.
    
 0.743
jhhlp_003567
YL1_C domain-containing protein.
    
 0.729
jhhlp_008333
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.725
jhhlp_007266
RPOL4c domain-containing protein.
    
 0.722
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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