STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_003151Uncharacterized protein. (544 aa)    
Predicted Functional Partners:
jhhlp_007720
NMD3 domain-containing protein.
   
 
 0.932
jhhlp_006597
CP-type G domain-containing protein.
   
 
 0.908
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.897
jhhlp_004610
Peptidase_M24 domain-containing protein.
   
 
 0.890
jhhlp_004042
Uncharacterized protein.
    
 
 0.807
jhhlp_006913
TRASH domain-containing protein.
   
 
 0.783
jhhlp_000237
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
 
 0.783
jhhlp_001170
Ribosomal_L23eN domain-containing protein.
   
 
 0.779
jhhlp_005505
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.778
jhhlp_004659
Uncharacterized protein.
   
 
 0.768
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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