STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_003187Fe2OG dioxygenase domain-containing protein. (348 aa)    
Predicted Functional Partners:
jhhlp_002519
Uncharacterized protein.
   
 
 0.648
jhhlp_006361
ENDO3c domain-containing protein.
     
 0.601
jhhlp_001123
YTH domain-containing protein.
      
 0.543
jhhlp_002013
2OG-FeII_Oxy_2 domain-containing protein.
   
  
 0.537
jhhlp_008849
Amidase domain-containing protein.
 
      0.528
jhhlp_006316
Amidase domain-containing protein.
 
      0.522
jhhlp_000168
Amidase domain-containing protein.
      0.508
jhhlp_002231
Uncharacterized protein.
      
 0.473
jhhlp_008099
Uncharacterized protein.
   
  
 0.470
jhhlp_003546
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.441
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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