Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
jhhlp_000235 | jhhlp_001264 | A0A2N3NKC4 | A0A2N3NHR6 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
jhhlp_000235 | jhhlp_003224 | A0A2N3NKC4 | A0A2N3NG89 | Uncharacterized protein. | Uncharacterized protein. | 0.650 |
jhhlp_000235 | jhhlp_003298 | A0A2N3NKC4 | A0A2N3NGG7 | Uncharacterized protein. | Uncharacterized protein. | 0.918 |
jhhlp_000679 | jhhlp_003224 | A0A2N3NJ69 | A0A2N3NG89 | Uncharacterized protein. | Uncharacterized protein. | 0.778 |
jhhlp_000679 | jhhlp_007735 | A0A2N3NJ69 | A0A2N3N0E8 | Uncharacterized protein. | ANK_REP_REGION domain-containing protein. | 0.414 |
jhhlp_000679 | jhhlp_008358 | A0A2N3NJ69 | A0A2N3MXU4 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.968 |
jhhlp_001196 | jhhlp_001505 | A0A2N3NHS6 | A0A2N3NIC8 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.991 |
jhhlp_001196 | jhhlp_003224 | A0A2N3NHS6 | A0A2N3NG89 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.625 |
jhhlp_001196 | jhhlp_003298 | A0A2N3NHS6 | A0A2N3NGG7 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.796 |
jhhlp_001196 | jhhlp_006212 | A0A2N3NHS6 | A0A2N3N5A4 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.529 |
jhhlp_001196 | jhhlp_007735 | A0A2N3NHS6 | A0A2N3N0E8 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | ANK_REP_REGION domain-containing protein. | 0.401 |
jhhlp_001264 | jhhlp_000235 | A0A2N3NHR6 | A0A2N3NKC4 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.906 |
jhhlp_001264 | jhhlp_003224 | A0A2N3NHR6 | A0A2N3NG89 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.612 |
jhhlp_001264 | jhhlp_003298 | A0A2N3NHR6 | A0A2N3NGG7 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.972 |
jhhlp_001505 | jhhlp_001196 | A0A2N3NIC8 | A0A2N3NHS6 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.991 |
jhhlp_001505 | jhhlp_003224 | A0A2N3NIC8 | A0A2N3NG89 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Uncharacterized protein. | 0.626 |
jhhlp_001505 | jhhlp_003298 | A0A2N3NIC8 | A0A2N3NGG7 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Uncharacterized protein. | 0.640 |
jhhlp_001505 | jhhlp_006212 | A0A2N3NIC8 | A0A2N3N5A4 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Uncharacterized protein. | 0.754 |
jhhlp_003224 | jhhlp_000235 | A0A2N3NG89 | A0A2N3NKC4 | Uncharacterized protein. | Uncharacterized protein. | 0.650 |
jhhlp_003224 | jhhlp_000679 | A0A2N3NG89 | A0A2N3NJ69 | Uncharacterized protein. | Uncharacterized protein. | 0.778 |
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