STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_003339Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
jhhlp_001900
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.952
jhhlp_001936
RING-type domain-containing protein.
  
 0.933
jhhlp_005605
Uncharacterized protein.
  
 
 0.930
jhhlp_004569
PALP domain-containing protein.
 
 0.917
jhhlp_000448
Tryptophan synthase.
  
 
 0.914
jhhlp_005658
Uncharacterized protein.
  
 
0.902
jhhlp_000198
Homoserine dehydrogenase.
 
 
 0.883
jhhlp_000944
Uncharacterized protein.
 
 
 0.860
jhhlp_006766
Adenosylhomocysteinase.
  
 0.851
jhhlp_003486
Uncharacterized protein.
    
 0.840
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.