STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_001120Uncharacterized protein. (1300 aa)    
Predicted Functional Partners:
jhhlp_006134
Uncharacterized protein.
  
 0.992
jhhlp_000187
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.990
jhhlp_001139
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.988
jhhlp_004677
Nup188_C domain-containing protein.
  
 0.951
jhhlp_004211
Nup54 domain-containing protein.
    
 0.916
jhhlp_002225
Uncharacterized protein.
    
 
 0.906
jhhlp_006294
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
   0.903
jhhlp_001121
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
 
  
   0.874
jhhlp_000062
Uncharacterized protein.
   
 0.845
jhhlp_001471
Uncharacterized protein.
    
 0.832
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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