STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_001235Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
jhhlp_005857
Plug_translocon domain-containing protein.
   
 
 0.892
jhhlp_004575
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.851
jhhlp_008579
Uncharacterized protein.
    
   0.849
jhhlp_006118
Ribosomal_L18_c domain-containing protein.
   
   0.837
jhhlp_000909
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.833
jhhlp_008691
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.830
jhhlp_007220
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.829
jhhlp_006451
Ribosomal_L7Ae domain-containing protein.
   
   0.827
jhhlp_006149
Ribosomal_L7Ae domain-containing protein.
   
   0.825
jhhlp_007110
Uncharacterized protein.
   
   0.820
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.