STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_001209Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
jhhlp_000115
Uncharacterized protein.
  
  
 0.960
jhhlp_008316
Ribosomal_S10 domain-containing protein.
   
 
 0.875
jhhlp_001151
Ribosomal_S10 domain-containing protein.
   
 
 0.859
jhhlp_004069
S1-like domain-containing protein; Belongs to the eIF-1A family.
   
  
 0.834
jhhlp_003502
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.822
jhhlp_003290
Ribosomal_S7 domain-containing protein.
  
   0.804
jhhlp_001064
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
   0.804
jhhlp_002304
Zn(2)-C6 fungal-type domain-containing protein.
  
 
 0.785
jhhlp_003916
Uncharacterized protein.
  
  
 0.778
jhhlp_000440
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
  
 0.778
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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