STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_001293Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (333 aa)    
Predicted Functional Partners:
jhhlp_001410
Ribosomal_L14e domain-containing protein.
   
 
 0.722
jhhlp_001434
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.702
jhhlp_001773
Uncharacterized protein.
    
 
 0.629
jhhlp_001179
Ribosomal_L28e domain-containing protein.
   
   0.570
jhhlp_002729
Uncharacterized protein.
   
   0.564
jhhlp_002240
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.557
jhhlp_007291
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.536
jhhlp_005493
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
 
      0.535
jhhlp_002079
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.529
jhhlp_001080
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.528
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.