STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_001386UAS domain-containing protein. (505 aa)    
Predicted Functional Partners:
jhhlp_006367
UBA domain-containing protein.
   
 0.979
jhhlp_007155
TUG-UBL1 domain-containing protein.
    
 0.976
jhhlp_005817
Uncharacterized protein.
    
 0.964
jhhlp_007387
MPN domain-containing protein.
    
 
 0.961
jhhlp_001511
Uncharacterized protein.
    
 
 0.957
jhhlp_000410
PRKCSH domain-containing protein.
    
 
 0.937
jhhlp_000603
Uncharacterized protein.
   
 
 0.935
jhhlp_001828
RING-type domain-containing protein.
    
 
 0.931
jhhlp_007077
UBX domain-containing protein.
    
 
 0.928
jhhlp_004324
Uncharacterized protein.
    
 
 0.908
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.