STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_000625Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
jhhlp_004299
Bms1-type G domain-containing protein.
   
  0.599
jhhlp_003636
Uncharacterized protein.
   
  0.597
jhhlp_006598
Uncharacterized protein.
   
  0.594
jhhlp_005848
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
  0.591
jhhlp_004538
Uncharacterized protein.
   
 0.588
jhhlp_002400
KH domain-containing protein.
   
  0.585
jhhlp_006850
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.582
jhhlp_001080
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.582
jhhlp_000019
Uncharacterized protein.
   
  0.582
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.581
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
Server load: low (26%) [HD]