jhhlp_000910 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_000910

N-acetyltransferase domain-containing protein. (234 aa)

Predicted Functional Partners:

jhhlp_006576

0.482

jhhlp_006889

0.442

jhhlp_005992

0.442

jhhlp_006263

0.442

jhhlp_004205

0.442

jhhlp_001728

0.442

jhhlp_001750

0.442

jhhlp_000741

0.442

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000741	jhhlp_000910	A0A2N3NJC3	A0A2N3NK20	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.442
jhhlp_000910	jhhlp_000741	A0A2N3NK20	A0A2N3NJC3	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.442
jhhlp_000910	jhhlp_001728	A0A2N3NK20	A0A2N3NH23	N-acetyltransferase domain-containing protein.	Carrier domain-containing protein.	0.442
jhhlp_000910	jhhlp_001750	A0A2N3NK20	A0A2N3NH90	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.442
jhhlp_000910	jhhlp_004205	A0A2N3NK20	A0A2N3NB08	N-acetyltransferase domain-containing protein.	Carrier domain-containing protein.	0.442
jhhlp_000910	jhhlp_005992	A0A2N3NK20	A0A2N3N4N1	N-acetyltransferase domain-containing protein.	Carrier domain-containing protein.	0.442
jhhlp_000910	jhhlp_006263	A0A2N3NK20	A0A2N3N5F0	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.442
jhhlp_000910	jhhlp_006576	A0A2N3NK20	A0A2N3N6C8	N-acetyltransferase domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.482
jhhlp_000910	jhhlp_006889	A0A2N3NK20	A0A2N3N326	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.442
jhhlp_001728	jhhlp_000910	A0A2N3NH23	A0A2N3NK20	Carrier domain-containing protein.	N-acetyltransferase domain-containing protein.	0.442
jhhlp_001750	jhhlp_000910	A0A2N3NH90	A0A2N3NK20	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.442
jhhlp_004205	jhhlp_000910	A0A2N3NB08	A0A2N3NK20	Carrier domain-containing protein.	N-acetyltransferase domain-containing protein.	0.442
jhhlp_005992	jhhlp_000910	A0A2N3N4N1	A0A2N3NK20	Carrier domain-containing protein.	N-acetyltransferase domain-containing protein.	0.442
jhhlp_006263	jhhlp_000910	A0A2N3N5F0	A0A2N3NK20	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.442
jhhlp_006576	jhhlp_000910	A0A2N3N6C8	A0A2N3NK20	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	N-acetyltransferase domain-containing protein.	0.482
jhhlp_006889	jhhlp_000910	A0A2N3N326	A0A2N3NK20	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.442