STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_000448Tryptophan synthase. (707 aa)    
Predicted Functional Partners:
jhhlp_004679
Uncharacterized protein.
 
 0.998
jhhlp_007133
Uncharacterized protein.
 
 
 0.997
jhhlp_006745
Chorismate_bind domain-containing protein.
 
 
 0.987
jhhlp_005500
Uncharacterized protein.
 
 
 0.986
jhhlp_002433
Glutamine amidotransferase type-1 domain-containing protein.
 
 
 0.984
jhhlp_001023
Histidine biosynthesis trifunctional protein.
  
  
 0.980
jhhlp_008070
Uncharacterized protein.
  
  
 0.975
jhhlp_005886
Aminotran_1_2 domain-containing protein.
  
  
 0.975
jhhlp_002498
Aspartokinase.
  
 
 0.958
jhhlp_008718
PALP domain-containing protein.
  
 0.954
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.