STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_000005Helicase C-terminal domain-containing protein. (110 aa)    
Predicted Functional Partners:
jhhlp_000006
Uncharacterized protein; Belongs to the DEAD box helicase family.
 
     0.950
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.932
jhhlp_002321
Uncharacterized protein.
   
 0.912
jhhlp_007165
CP-type G domain-containing protein.
   
 0.892
jhhlp_000413
RNA helicase.
 
 
 0.873
jhhlp_008608
Uncharacterized protein.
   
 0.865
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.861
jhhlp_001072
Uncharacterized protein.
   
 0.842
jhhlp_005822
Uncharacterized protein; Belongs to the DEAD box helicase family.
 
0.835
jhhlp_002242
ENDO3c domain-containing protein.
   
 0.830
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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