STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_000134Uncharacterized protein. (918 aa)    
Predicted Functional Partners:
jhhlp_008323
Uncharacterized protein.
   
   0.669
jhhlp_005706
U3 small nucleolar RNA-associated protein 22.
   
   0.663
jhhlp_003921
Uncharacterized protein.
   
   0.663
jhhlp_002610
WD_REPEATS_REGION domain-containing protein.
   
   0.663
jhhlp_000950
WD_REPEATS_REGION domain-containing protein.
   
   0.663
jhhlp_003636
Uncharacterized protein.
   
   0.651
jhhlp_004300
WD_REPEATS_REGION domain-containing protein.
   
   0.651
jhhlp_001315
G-patch domain-containing protein.
   
   0.649
jhhlp_005177
WD_REPEATS_REGION domain-containing protein.
   
   0.648
jhhlp_003411
Bms1-type G domain-containing protein.
   
   0.647
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.