Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB43919.1 | SEB43939.1 | SAMN05445871_0136 | SAMN05445871_0137 | Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | Hypothetical protein. | 0.914 |
SEB43919.1 | SEB43960.1 | SAMN05445871_0136 | SAMN05445871_0138 | Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | Nucleotidyl transferase. | 0.915 |
SEB43939.1 | SEB43919.1 | SAMN05445871_0137 | SAMN05445871_0136 | Hypothetical protein. | Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.914 |
SEB43939.1 | SEB43960.1 | SAMN05445871_0137 | SAMN05445871_0138 | Hypothetical protein. | Nucleotidyl transferase. | 0.945 |
SEB43960.1 | SEB43919.1 | SAMN05445871_0138 | SAMN05445871_0136 | Nucleotidyl transferase. | Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.915 |
SEB43960.1 | SEB43939.1 | SAMN05445871_0138 | SAMN05445871_0137 | Nucleotidyl transferase. | Hypothetical protein. | 0.945 |
SEB43960.1 | SEB65496.1 | SAMN05445871_0138 | SAMN05445871_0806 | Nucleotidyl transferase. | MurNAc alpha-1-phosphate uridylyltransferase. | 0.794 |
SEB43960.1 | SEB84629.1 | SAMN05445871_0138 | SAMN05445871_1182 | Nucleotidyl transferase. | UDP-glucose dehydrogenase. | 0.838 |
SEB43960.1 | SEC59451.1 | SAMN05445871_0138 | SAMN05445871_2490 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.786 |
SEB43960.1 | SEC82803.1 | SAMN05445871_0138 | SAMN05445871_2941 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.786 |
SEB43960.1 | SEC82853.1 | SAMN05445871_0138 | SAMN05445871_2942 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.895 |
SEB43960.1 | SEC82952.1 | SAMN05445871_0138 | SAMN05445871_2944 | Nucleotidyl transferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.919 |
SEB43960.1 | SED61769.1 | SAMN05445871_0138 | SAMN05445871_3541 | Nucleotidyl transferase. | UDPglucose 6-dehydrogenase. | 0.856 |
SEB43960.1 | SEE12447.1 | SAMN05445871_0138 | SAMN05445871_4717 | Nucleotidyl transferase. | Phosphoenolpyruvate mutase. | 0.829 |
SEB65496.1 | SEB43960.1 | SAMN05445871_0806 | SAMN05445871_0138 | MurNAc alpha-1-phosphate uridylyltransferase. | Nucleotidyl transferase. | 0.794 |
SEB65496.1 | SEB84629.1 | SAMN05445871_0806 | SAMN05445871_1182 | MurNAc alpha-1-phosphate uridylyltransferase. | UDP-glucose dehydrogenase. | 0.635 |
SEB65496.1 | SEC59451.1 | SAMN05445871_0806 | SAMN05445871_2490 | MurNAc alpha-1-phosphate uridylyltransferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.556 |
SEB65496.1 | SEC82803.1 | SAMN05445871_0806 | SAMN05445871_2941 | MurNAc alpha-1-phosphate uridylyltransferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.556 |
SEB65496.1 | SEC82853.1 | SAMN05445871_0806 | SAMN05445871_2942 | MurNAc alpha-1-phosphate uridylyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.908 |
SEB65496.1 | SEC82952.1 | SAMN05445871_0806 | SAMN05445871_2944 | MurNAc alpha-1-phosphate uridylyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.911 |
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