Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB52146.1 | SEC37887.1 | SAMN05445871_0434 | SAMN05445871_2116 | Putative ATP-dependent endonuclease of the OLD family. | Hypothetical protein. | 0.652 |
SEB52146.1 | SEC47313.1 | SAMN05445871_0434 | SAMN05445871_2279 | Putative ATP-dependent endonuclease of the OLD family. | Hypothetical protein. | 0.802 |
SEB67051.1 | SEC37887.1 | SAMN05445871_0839 | SAMN05445871_2116 | Putative copper resistance protein D. | Hypothetical protein. | 0.593 |
SEB67051.1 | SED61113.1 | SAMN05445871_0839 | SAMN05445871_3528 | Putative copper resistance protein D. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.761 |
SEB67051.1 | SED76251.1 | SAMN05445871_0839 | SAMN05445871_3862 | Putative copper resistance protein D. | Cellulose biosynthesis protein BcsE. | 0.500 |
SEB67051.1 | SED98192.1 | SAMN05445871_0839 | SAMN05445871_4394 | Putative copper resistance protein D. | Initiator Replication protein. | 0.805 |
SEB73870.1 | SEC37887.1 | SAMN05445871_0977 | SAMN05445871_2116 | Bilirubin oxidase. | Hypothetical protein. | 0.702 |
SEC37832.1 | SEC37887.1 | SAMN05445871_2115 | SAMN05445871_2116 | Hypothetical protein. | Hypothetical protein. | 0.519 |
SEC37887.1 | SEB52146.1 | SAMN05445871_2116 | SAMN05445871_0434 | Hypothetical protein. | Putative ATP-dependent endonuclease of the OLD family. | 0.652 |
SEC37887.1 | SEB67051.1 | SAMN05445871_2116 | SAMN05445871_0839 | Hypothetical protein. | Putative copper resistance protein D. | 0.593 |
SEC37887.1 | SEB73870.1 | SAMN05445871_2116 | SAMN05445871_0977 | Hypothetical protein. | Bilirubin oxidase. | 0.702 |
SEC37887.1 | SEC37832.1 | SAMN05445871_2116 | SAMN05445871_2115 | Hypothetical protein. | Hypothetical protein. | 0.519 |
SEC37887.1 | SEC47313.1 | SAMN05445871_2116 | SAMN05445871_2279 | Hypothetical protein. | Hypothetical protein. | 0.802 |
SEC37887.1 | SED61113.1 | SAMN05445871_2116 | SAMN05445871_3528 | Hypothetical protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.646 |
SEC37887.1 | SED76251.1 | SAMN05445871_2116 | SAMN05445871_3862 | Hypothetical protein. | Cellulose biosynthesis protein BcsE. | 0.563 |
SEC37887.1 | SED98192.1 | SAMN05445871_2116 | SAMN05445871_4394 | Hypothetical protein. | Initiator Replication protein. | 0.599 |
SEC37887.1 | atpH | SAMN05445871_2116 | SAMN05445871_0252 | Hypothetical protein. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.539 |
SEC37887.1 | trmB | SAMN05445871_2116 | SAMN05445871_1032 | Hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.609 |
SEC47313.1 | SEB52146.1 | SAMN05445871_2279 | SAMN05445871_0434 | Hypothetical protein. | Putative ATP-dependent endonuclease of the OLD family. | 0.802 |
SEC47313.1 | SEC37887.1 | SAMN05445871_2279 | SAMN05445871_2116 | Hypothetical protein. | Hypothetical protein. | 0.802 |
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