Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEB53808.1 | SEC42479.1 | SAMN05445871_0491 | SAMN05445871_2196 | Indolepyruvate ferredoxin oxidoreductase. | methylmalonyl-CoA mutase. | 0.941 |
| SEB53808.1 | SED03054.1 | SAMN05445871_0491 | SAMN05445871_3355 | Indolepyruvate ferredoxin oxidoreductase. | Indolepyruvate ferredoxin oxidoreductase. | 0.973 |
| SEB53808.1 | SEE14256.1 | SAMN05445871_0491 | SAMN05445871_4757 | Indolepyruvate ferredoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
| SEB53808.1 | SEE16830.1 | SAMN05445871_0491 | SAMN05445871_4820 | Indolepyruvate ferredoxin oxidoreductase. | succinyl-CoA:acetate CoA-transferase. | 0.708 |
| SEB53808.1 | SEE66249.1 | SAMN05445871_0491 | SAMN05445871_5670 | Indolepyruvate ferredoxin oxidoreductase. | Urea carboxylase. | 0.904 |
| SEB53808.1 | SEE74131.1 | SAMN05445871_0491 | SAMN05445871_5982 | Indolepyruvate ferredoxin oxidoreductase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.745 |
| SEB53808.1 | mdh | SAMN05445871_0491 | SAMN05445871_4175 | Indolepyruvate ferredoxin oxidoreductase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.732 |
| SEB53808.1 | sucC | SAMN05445871_0491 | SAMN05445871_0852 | Indolepyruvate ferredoxin oxidoreductase. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.745 |
| SEB53808.1 | sucD | SAMN05445871_0491 | SAMN05445871_0853 | Indolepyruvate ferredoxin oxidoreductase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.630 |
| SEB73030.1 | SEC42479.1 | SAMN05445871_0960 | SAMN05445871_2196 | Citrate synthase. | methylmalonyl-CoA mutase. | 0.917 |
| SEB73030.1 | SEE14256.1 | SAMN05445871_0960 | SAMN05445871_4757 | Citrate synthase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.873 |
| SEB73030.1 | SEE16830.1 | SAMN05445871_0960 | SAMN05445871_4820 | Citrate synthase. | succinyl-CoA:acetate CoA-transferase. | 0.606 |
| SEB73030.1 | SEE66249.1 | SAMN05445871_0960 | SAMN05445871_5670 | Citrate synthase. | Urea carboxylase. | 0.842 |
| SEB73030.1 | SEE74131.1 | SAMN05445871_0960 | SAMN05445871_5982 | Citrate synthase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.832 |
| SEB73030.1 | mdh | SAMN05445871_0960 | SAMN05445871_4175 | Citrate synthase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.991 |
| SEB73030.1 | sucC | SAMN05445871_0960 | SAMN05445871_0852 | Citrate synthase. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.913 |
| SEB73030.1 | sucD | SAMN05445871_0960 | SAMN05445871_0853 | Citrate synthase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.603 |
| SEC42479.1 | SEB53808.1 | SAMN05445871_2196 | SAMN05445871_0491 | methylmalonyl-CoA mutase. | Indolepyruvate ferredoxin oxidoreductase. | 0.941 |
| SEC42479.1 | SEB73030.1 | SAMN05445871_2196 | SAMN05445871_0960 | methylmalonyl-CoA mutase. | Citrate synthase. | 0.917 |
| SEC42479.1 | SED03054.1 | SAMN05445871_2196 | SAMN05445871_3355 | methylmalonyl-CoA mutase. | Indolepyruvate ferredoxin oxidoreductase. | 0.941 |
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