STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED67174.1Alcohol dehydrogenase. (422 aa)    
Predicted Functional Partners:
SEE14256.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
 
 0.964
SEB69503.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.944
SEE78257.1
Aryl-alcohol dehydrogenase.
    
 0.939
SED67214.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
  
 0.897
SED54556.1
Alcohol dehydrogenase, propanol-preferring.
  
 0.862
SEE33536.1
Alcohol dehydrogenase, propanol-preferring.
  
 0.862
SEE18657.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 0.854
SEE79178.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 0.854
SED56797.1
Alcohol dehydrogenase, propanol-preferring.
  
 0.833
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.787
Your Current Organism:
Paraburkholderia caballeronis
NCBI taxonomy Id: 416943
Other names: Burkholderia caballeronis, Burkholderia caballeronis Martinez et al. 2014, Burkholderia sp. TNe-834, Burkholderia sp. TNe-835, Burkholderia sp. TNe-841, Burkholderia sp. TNe-8411, Burkholderia sp. TNe-8641, Burkholderia sp. TNe-8683, Burkholderia sp. TNe-869, Burkholderia sp. TNe-878, CIP 110324, LMG 26416, LMG:26416, P. caballeronis, Paraburkholderia caballeronis (Martinez et al. 2014) Sawana et al. 2017, strain TNe-841
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