STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED77276.1Sugar phosphate permease. (467 aa)    
Predicted Functional Partners:
SED77306.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
  
  0.744
SED77342.1
Catechol-2,3-dioxygenase.
 
     0.731
SED77468.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
     0.618
SED77393.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.604
SED77642.1
Cupin domain-containing protein.
 
    0.593
nadX-2
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
     0.578
SED77509.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.574
SED77734.1
Phenylpropionate dioxygenase, large terminal subunit.
 
     0.560
SED77550.1
Transcriptional regulator, IclR family.
  
    0.501
SED77591.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.498
Your Current Organism:
Paraburkholderia caballeronis
NCBI taxonomy Id: 416943
Other names: Burkholderia caballeronis, Burkholderia caballeronis Martinez et al. 2014, Burkholderia sp. TNe-834, Burkholderia sp. TNe-835, Burkholderia sp. TNe-841, Burkholderia sp. TNe-8411, Burkholderia sp. TNe-8641, Burkholderia sp. TNe-8683, Burkholderia sp. TNe-869, Burkholderia sp. TNe-878, CIP 110324, LMG 26416, LMG:26416, P. caballeronis, Paraburkholderia caballeronis (Martinez et al. 2014) Sawana et al. 2017, strain TNe-841
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.