STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE66670.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
SEE66692.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.952
SEE66624.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 
 0.935
SEB41538.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.836
SEB41518.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 
 0.832
SEC26437.1
Carbon monoxide dehydrogenase, large subunit apoprotein.
 
 
 0.825
SEE66645.1
Carbon-monoxide dehydrogenase small subunit.
 
  
  0.782
SEB41582.1
Hypothetical protein.
 
     0.780
SEC26547.1
Carbon monoxide dehydrogenase, medium subunit.
 
 
 0.780
SEC26265.1
Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain.
 
     0.778
SEE26356.1
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.
 
 
 0.772
Your Current Organism:
Paraburkholderia caballeronis
NCBI taxonomy Id: 416943
Other names: Burkholderia caballeronis, Burkholderia caballeronis Martinez et al. 2014, Burkholderia sp. TNe-834, Burkholderia sp. TNe-835, Burkholderia sp. TNe-841, Burkholderia sp. TNe-8411, Burkholderia sp. TNe-8641, Burkholderia sp. TNe-8683, Burkholderia sp. TNe-869, Burkholderia sp. TNe-878, CIP 110324, LMG 26416, LMG:26416, P. caballeronis, Paraburkholderia caballeronis (Martinez et al. 2014) Sawana et al. 2017, strain TNe-841
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