STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB86939.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
SDB86925.1
Hypothetical protein.
  
 0.993
SDB86952.1
Uncharacterized membrane protein.
 
  
 0.988
SDC87512.1
Putative DNA-binding domain-containing protein.
  
 0.963
SDC87605.1
Uncharacterized membrane protein.
 
  
 0.962
SDC87486.1
Putative oxidoreductase.
 
  
 0.875
SDB82364.1
Hypothetical protein.
   
    0.793
SDE17122.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
   
    0.684
SDB91782.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
    0.683
SDE08889.1
Type IV secretion system protein VirB2.
   
    0.682
msrQ
Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]
 
  
 0.585
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.