STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB87334.1Two component transcriptional regulator, LuxR family. (218 aa)    
Predicted Functional Partners:
SDB92712.1
Signal transduction histidine kinase.
 
 0.990
SDB87321.1
Signal transduction histidine kinase.
 
 0.980
SDB84760.1
Hypothetical protein.
 
 
 0.972
SDD14981.1
PAS domain S-box-containing protein.
 0.941
SDE49519.1
Two-component system, NarL family, sensor histidine kinase UhpB.
 0.941
SDD14879.1
PAS domain S-box-containing protein.
 0.940
SDE43967.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 0.940
SDE28936.1
PAS domain S-box-containing protein.
 
 
 0.934
SDC94045.1
PAS domain S-box-containing protein.
   
 0.929
SDE14836.1
PAS domain S-box-containing protein.
 
 
 0.926
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.