STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB95710.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
SDD07682.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
    0.810
SDC66985.1
Acyl transferase domain-containing protein.
  
 
0.712
SDB95689.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.688
SDC27763.1
Aldo/keto reductase.
   
 
 0.671
SDB95662.1
Acetyl esterase.
 
    0.664
SDB95734.1
Uncharacterized domain 1-containing protein.
  
    0.610
SDB95754.1
Stress responsive A/B Barrel Domain.
  
    0.600
SDB90102.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.586
SDC60384.1
Putative intracellular protease/amidase.
 
    0.574
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
  0.558
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.