Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB86229.1 | SDB86239.1 | SAMN05421548_101406 | SAMN05421548_101407 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | 0.998 |
SDB86229.1 | SDC51388.1 | SAMN05421548_101406 | SAMN05421548_107150 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | rsbT antagonist protein RsbS. | 0.953 |
SDB86229.1 | SDC51422.1 | SAMN05421548_101406 | SAMN05421548_107151 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | rsbT co-antagonist protein RsbR. | 0.953 |
SDB86229.1 | SDD86259.1 | SAMN05421548_101406 | SAMN05421548_12736 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | 0.691 |
SDB86229.1 | SDD86317.1 | SAMN05421548_101406 | SAMN05421548_12738 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | 0.977 |
SDB86239.1 | SDB86229.1 | SAMN05421548_101407 | SAMN05421548_101406 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | 0.998 |
SDB86239.1 | SDC51388.1 | SAMN05421548_101407 | SAMN05421548_107150 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | rsbT antagonist protein RsbS. | 0.966 |
SDB86239.1 | SDC51422.1 | SAMN05421548_101407 | SAMN05421548_107151 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | rsbT co-antagonist protein RsbR. | 0.966 |
SDB86239.1 | SDD86259.1 | SAMN05421548_101407 | SAMN05421548_12736 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | 0.991 |
SDB86239.1 | SDD86317.1 | SAMN05421548_101407 | SAMN05421548_12738 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | 0.677 |
SDB92712.1 | SDC51269.1 | SAMN05421548_102240 | SAMN05421548_107147 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDB92712.1 | SDC51308.1 | SAMN05421548_102240 | SAMN05421548_107148 | Signal transduction histidine kinase. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.996 |
SDB92712.1 | SDC51345.1 | SAMN05421548_102240 | SAMN05421548_107149 | Signal transduction histidine kinase. | Serine/threonine-protein kinase RsbT. | 0.969 |
SDB92712.1 | SDC51388.1 | SAMN05421548_102240 | SAMN05421548_107150 | Signal transduction histidine kinase. | rsbT antagonist protein RsbS. | 0.986 |
SDB92712.1 | SDC51422.1 | SAMN05421548_102240 | SAMN05421548_107151 | Signal transduction histidine kinase. | rsbT co-antagonist protein RsbR. | 0.986 |
SDB92712.1 | SDE28211.1 | SAMN05421548_102240 | SAMN05421548_14025 | Signal transduction histidine kinase. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.981 |
SDC51269.1 | SDB92712.1 | SAMN05421548_107147 | SAMN05421548_102240 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDC51269.1 | SDC51308.1 | SAMN05421548_107147 | SAMN05421548_107148 | Signal transduction histidine kinase. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.998 |
SDC51269.1 | SDC51345.1 | SAMN05421548_107147 | SAMN05421548_107149 | Signal transduction histidine kinase. | Serine/threonine-protein kinase RsbT. | 0.874 |
SDC51269.1 | SDC51388.1 | SAMN05421548_107147 | SAMN05421548_107150 | Signal transduction histidine kinase. | rsbT antagonist protein RsbS. | 0.999 |
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