STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC51388.1rsbT antagonist protein RsbS. (119 aa)    
Predicted Functional Partners:
SDC51269.1
Signal transduction histidine kinase.
 
 0.999
SDC51308.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.999
SDC51345.1
Serine/threonine-protein kinase RsbT.
 
 0.999
SDC51422.1
rsbT co-antagonist protein RsbR.
 
 
   0.997
SDB92712.1
Signal transduction histidine kinase.
  
 
 0.986
SDE28211.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.972
SDB86239.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.966
SDD86317.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.966
SDB86229.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  0.953
SDD86259.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  0.953
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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