STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC75678.1Ferredoxin, 2Fe-2S. (98 aa)    
Predicted Functional Partners:
SDC75844.1
Cysteine desulfurase.
  
 0.969
SDC00161.1
FeS assembly protein IscX.
 
  
 0.960
hscB
Molecular chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.
 
  
 0.960
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
 
 0.959
SDC00328.1
FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
 
 0.956
SDB85876.1
Cytochrome P450.
  
 0.949
SDE17608.1
Nitrogen fixation protein NifU.
  
 0.929
SDE23270.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.927
cyaY
CyaY protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
  
 
 0.917
SDD86633.1
Glutamate synthase (NADH) small subunit.
    
 0.912
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.