STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE41551.1Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. (266 aa)    
Predicted Functional Partners:
SDE41474.1
P2-like prophage tail protein X.
 
     0.915
SDE41442.1
Phage head completion protein (GPL).
 
     0.912
SDE41610.1
P2 phage tail completion protein R (GpR).
 
     0.860
SDE41642.1
Phage virion morphogenesis (putative tail completion) protein.
 
     0.859
SDE41671.1
Phage baseplate assembly protein V.
 
     0.859
SDE41385.1
Phage major capsid protein, P2 family.
 
     0.856
SDE41412.1
Phage small terminase subunit.
 
   
 0.851
SDE41351.1
Phage capsid scaffolding protein (GPO) serine peptidase.
 
     0.833
SDE41698.1
Hypothetical protein.
 
    0.831
SDE41861.1
Hypothetical protein.
 
    0.822
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.