STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE45673.1Outer membrane protein (porin). (378 aa)    
Predicted Functional Partners:
SDB88204.1
Thioredoxin.
  
 
   0.775
SDC35743.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.764
SDD66626.1
Hypothetical protein.
  
     0.751
SDD08639.1
Hypothetical protein.
  
     0.747
SDD97172.1
Protein of unknown function.
  
     0.747
SDB88071.1
Protein of unknown function.
  
     0.746
SDC02371.1
Beta-barrel assembly machine subunit BamC.
  
     0.738
SDC30962.1
SnoaL-like domain-containing protein.
  
     0.735
SDB99988.1
Hypothetical protein.
  
     0.734
SDB97049.1
ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.732
Your Current Organism:
Burkholderia sp. TNe862
NCBI taxonomy Id: 416944
Other names: B. sp. TNe-862, Burkholderia sp. TNe-862
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