STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC80850.1Triacylglycerol lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (493 aa)    
Predicted Functional Partners:
OUC79021.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.735
OUC79058.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.717
OUC75641.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.693
OUC77016.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.685
OUC77328.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.683
OUC80851.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.643
OUC79615.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
OUC77214.1
Ethanolamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
OUC76521.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.622
OUC80866.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.607
Your Current Organism:
Gordonia lacunae
NCBI taxonomy Id: 417102
Other names: DSM 45085, G. lacunae, Gordonia lacunae le Roes et al. 2009, JCM 14873, NRRL B-24551, strain BS2
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.