STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC80365.1Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
OUC80362.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.923
OUC80361.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
OUC80363.1
Creatinine amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.908
OUC80358.1
Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.888
OUC80364.1
Pyridoxine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.836
OUC78606.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.810
OUC75514.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.806
OUC75851.1
XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.745
OUC76124.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.709
OUC79660.1
Nucleosidase; Catalyzes hydrolysis of n-ribosyl-purine into a purine and d-ribose; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.706
Your Current Organism:
Gordonia lacunae
NCBI taxonomy Id: 417102
Other names: DSM 45085, G. lacunae, Gordonia lacunae le Roes et al. 2009, JCM 14873, NRRL B-24551, strain BS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.